Unfortunately, this is one of those fun ideas that simply won't ever be possible. Even if we start with the easy one of just breaking chemical bonds, those bonds exist because it reduces the total energy of the system.
To "disrupt" those bonds, energy must be supplied, and to do it for even a small amount of material would require a tremendous amount of energy. Delivering that much energy over a distance just isn't possible because atmosphere in between would also be "disrupted". The disrupted material would also fly apart at high speeds and high temperatures. So any type of "ray" or "gun" would just turn into a bomb with a pistol grip trigger. I expect that the user experience testing would have lots of very negative reviews.